Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.195 | si:ch1073-429i10.3.1 | -0.096 |
| hspb1 | 0.191 | calm1a | -0.089 |
| stm | 0.185 | ccni | -0.085 |
| si:ch211-152c2.3 | 0.184 | gapdhs | -0.080 |
| s100a1 | 0.183 | tuba1c | -0.078 |
| fbl | 0.178 | marcksl1a | -0.078 |
| dkc1 | 0.177 | gpm6aa | -0.076 |
| polr3gla | 0.176 | hbbe1.3 | -0.076 |
| si:ch1073-80i24.3 | 0.176 | rnasekb | -0.076 |
| nnr | 0.175 | atp6v0cb | -0.073 |
| si:dkey-66i24.9 | 0.175 | hbae3 | -0.073 |
| nop58 | 0.172 | rtn1a | -0.073 |
| asb11 | 0.171 | zgc:56493 | -0.072 |
| h1m | 0.171 | atp6v1e1b | -0.070 |
| zgc:56699 | 0.170 | stmn1b | -0.070 |
| npm1a | 0.167 | atp6v1g1 | -0.069 |
| avd | 0.165 | krt4 | -0.069 |
| lig1 | 0.165 | pvalb1 | -0.069 |
| COX7A2 | 0.164 | wu:fb55g09 | -0.069 |
| ncl | 0.164 | hbae1.1 | -0.068 |
| si:dkey-228b2.6 | 0.164 | cyt1 | -0.067 |
| tbx16 | 0.164 | gng3 | -0.067 |
| si:dkey-68o6.5 | 0.163 | gpm6ab | -0.066 |
| bms1 | 0.161 | pvalb2 | -0.066 |
| ddx18 | 0.161 | cct2 | -0.066 |
| hnrnpa1b | 0.161 | sncb | -0.064 |
| ppig | 0.161 | vamp2 | -0.063 |
| si:dkeyp-114g9.1 | 0.160 | elavl3 | -0.062 |
| zmp:0000000624 | 0.158 | gnb1a | -0.062 |
| polr2gl | 0.157 | hbbe1.1 | -0.062 |
| gar1 | 0.156 | ckbb | -0.061 |
| ing5b | 0.156 | gabarapl2 | -0.061 |
| mphosph10 | 0.156 | atp6ap2 | -0.060 |
| nop56 | 0.155 | cyt1l | -0.060 |
| pprc1 | 0.154 | oaz1b | -0.060 |