Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ghrl | 0.771 | atp5pf | -0.039 |
| ndufs1 | 0.681 | ndufa4l | -0.032 |
| hhex | 0.679 | dynll1 | -0.031 |
| a1cf | 0.623 | ywhaz | -0.029 |
| LOC101885494 | 0.581 | ubc | -0.028 |
| sst1.2 | 0.568 | atp5l | -0.027 |
| pax4 | 0.567 | slc25a3b | -0.027 |
| si:dkey-269o24.1 | 0.564 | uqcrfs1 | -0.027 |
| pdx1 | 0.511 | calm3b | -0.026 |
| sst2 | 0.453 | cyt1 | -0.026 |
| LOC110438742 | 0.414 | cox6a1 | -0.026 |
| rprmb | 0.402 | smim15 | -0.026 |
| LOC101883493 | 0.397 | ndufa3 | -0.026 |
| srpx2 | 0.375 | prmt1 | -0.025 |
| si:ch211-59d15.4 | 0.374 | tuba8l4 | -0.024 |
| cntn5 | 0.351 | tubb4b | -0.024 |
| grapb | 0.340 | etf1b | -0.024 |
| si:ch73-173p19.2 | 0.318 | ndufb4 | -0.023 |
| XLOC-012358 | 0.300 | rbm4.2 | -0.023 |
| pla1a | 0.299 | ube2v2 | -0.022 |
| gpr4 | 0.297 | snrpb | -0.022 |
| CU464118.1 | 0.294 | eif2s1b | -0.022 |
| LOC103911173 | 0.292 | tmem54a | -0.022 |
| dkk3b | 0.292 | gpatch8 | -0.022 |
| cldn34a | 0.292 | nupr1a | -0.022 |
| kcnk9 | 0.276 | npc2 | -0.022 |
| kcnip3b | 0.270 | polb | -0.022 |
| irbpl | 0.260 | kdelr2a | -0.022 |
| pygma | 0.253 | CU694197.1 | -0.022 |
| XLOC-037028 | 0.240 | dad1 | -0.022 |
| LOC110438400 | 0.238 | ube2e1 | -0.022 |
| LOC103910292 | 0.235 | selenom | -0.021 |
| CABZ01072810.1 | 0.234 | copb2 | -0.021 |
| CT025651.1 | 0.221 | hmgn7 | -0.021 |
| usp53b | 0.210 | hmgn6 | -0.021 |