| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbr1a | 0.410 | hmga1a | -0.067 |
| eomesa | 0.378 | hmgb2a | -0.062 |
| tbr1b | 0.265 | si:dkey-151g10.6 | -0.056 |
| tbx21 | 0.249 | rplp1 | -0.055 |
| emx3 | 0.235 | hmgb2b | -0.053 |
| tmem163b | 0.208 | rpl12 | -0.052 |
| r3hdm1 | 0.207 | rps4x | -0.050 |
| neurod6b | 0.178 | stmn1a | -0.049 |
| fmn2a | 0.177 | rps12 | -0.049 |
| slc17a6a | 0.172 | rplp2l | -0.049 |
| ptprdb | 0.167 | rpl11 | -0.048 |
| sstr1a | 0.154 | id1 | -0.048 |
| efnb2a | 0.154 | sox11a | -0.047 |
| camk2n1a | 0.153 | pcna | -0.047 |
| zmp:0000001069 | 0.153 | rps15a | -0.047 |
| mef2ab | 0.152 | zgc:56493 | -0.046 |
| necab1 | 0.146 | ran | -0.046 |
| flrt1b | 0.142 | rps5 | -0.045 |
| si:dkey-22o12.2 | 0.139 | her15.1 | -0.045 |
| olfm1a | 0.136 | rpl29 | -0.045 |
| cdc42ep3 | 0.135 | rpl7a | -0.045 |
| ajap1 | 0.135 | sox3 | -0.045 |
| stxbp1b | 0.130 | mdka | -0.044 |
| sipa1l2 | 0.130 | npm1a | -0.043 |
| emx1 | 0.129 | XLOC-003690 | -0.043 |
| syt1a | 0.129 | rpl18 | -0.043 |
| camkvl | 0.128 | ranbp1 | -0.043 |
| rprma | 0.127 | rps20 | -0.043 |
| LO017848.1 | 0.127 | rpl13 | -0.043 |
| ncs1b | 0.127 | rps3a | -0.043 |
| mef2aa | 0.123 | msna | -0.043 |
| bcl11ba | 0.122 | rps7 | -0.043 |
| strbp | 0.122 | tuba8l4 | -0.042 |
| ccl44 | 0.118 | rps24 | -0.042 |
| rtn4rl2a | 0.116 | snrpf | -0.042 |