Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col11a1a | 0.091 | tuba1c | -0.025 |
| col2a1b | 0.085 | nova2 | -0.024 |
| CR381618.1 | 0.073 | si:ch211-137a8.4 | -0.024 |
| col24a1 | 0.071 | hmgb1b | -0.023 |
| fkbp9 | 0.071 | tuba1a | -0.023 |
| rcn3 | 0.070 | gpm6aa | -0.021 |
| col5a3b | 0.068 | ckbb | -0.020 |
| fkbp14 | 0.064 | marcksb | -0.020 |
| itgb1b.1 | 0.064 | elavl3 | -0.019 |
| sparc | 0.064 | mdkb | -0.019 |
| cldn1 | 0.063 | rtn1a | -0.019 |
| col7a1 | 0.063 | si:ch211-288g17.3 | -0.019 |
| ecrg4b | 0.063 | si:dkey-276j7.1 | -0.019 |
| lamb4 | 0.063 | fabp3 | -0.018 |
| fkbp7 | 0.062 | stmn1b | -0.018 |
| zgc:171775 | 0.062 | tmsb | -0.018 |
| si:dkey-102c8.3 | 0.062 | hmgb3a | -0.017 |
| cldni | 0.061 | rnasekb | -0.017 |
| kera | 0.061 | si:dkey-56m19.5 | -0.017 |
| paqr4b | 0.061 | sox11b | -0.017 |
| plod1a | 0.061 | XLOC-003690 | -0.017 |
| zgc:101810 | 0.061 | chd4a | -0.016 |
| fkbp10b | 0.060 | gpm6ab | -0.016 |
| spaca4l | 0.060 | hes6 | -0.016 |
| col1a1b | 0.059 | sox3 | -0.016 |
| col1a2 | 0.059 | tmpob | -0.016 |
| padi2 | 0.059 | XLOC-003689 | -0.016 |
| vkorc1 | 0.059 | apex1 | -0.015 |
| postnb | 0.058 | cadm3 | -0.015 |
| crtap | 0.057 | ddx39ab | -0.015 |
| kdelr3 | 0.057 | epb41a | -0.015 |
| serpinh1b | 0.057 | fabp7a | -0.015 |
| capn2a | 0.056 | h2afva | -0.015 |
| col4a5 | 0.056 | hdac1 | -0.015 |
| col9a3 | 0.056 | nono | -0.015 |