Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CU499330.1 | 0.325 | fabp3 | -0.056 |
| cxcr3.2 | 0.315 | mdka | -0.053 |
| csf1rb | 0.308 | hmgb1b | -0.047 |
| laptm5 | 0.302 | si:ch211-137a8.4 | -0.046 |
| nrros | 0.288 | cx43.4 | -0.043 |
| spi1b | 0.272 | her15.1 | -0.043 |
| coro1a | 0.267 | marcksb | -0.040 |
| spi1a | 0.267 | XLOC-003690 | -0.040 |
| cd83 | 0.265 | hmgb3a | -0.039 |
| plek | 0.263 | id1 | -0.037 |
| FERMT3 (1 of many) | 0.263 | msi1 | -0.037 |
| grap2b | 0.257 | sparc | -0.037 |
| wasa | 0.254 | tuba1c | -0.037 |
| gpr183a | 0.251 | XLOC-003689 | -0.037 |
| parvg | 0.250 | sox11a | -0.036 |
| fcer1gl | 0.249 | tuba1a | -0.036 |
| wasb | 0.249 | boc | -0.035 |
| gmfg | 0.249 | fabp7a | -0.035 |
| rnaset2l | 0.247 | mdkb | -0.035 |
| zgc:64051 | 0.246 | mex3b | -0.035 |
| LOC108180725 | 0.245 | sox11b | -0.035 |
| havcr1 | 0.244 | XLOC-003692 | -0.035 |
| cmklr1 | 0.241 | pbx4 | -0.033 |
| si:ch73-248e21.5 | 0.241 | si:ch211-288g17.3 | -0.033 |
| cx32.2 | 0.240 | sox3 | -0.033 |
| hhex | 0.240 | her4.2 | -0.033 |
| lcp2a | 0.240 | cdh2 | -0.031 |
| mpeg1.1 | 0.240 | hes6 | -0.031 |
| tnfaip8l2a | 0.240 | tox | -0.031 |
| itgae.2 | 0.239 | foxp4 | -0.030 |
| si:ch211-102c2.4 | 0.239 | si:ch73-46j18.5 | -0.030 |
| lcp1 | 0.237 | tmeff1b | -0.030 |
| si:dkey-148a17.6 | 0.235 | abhd6a | -0.030 |
| itgb2 | 0.234 | her2 | -0.029 |
| grap2a | 0.233 | her4.1 | -0.029 |