Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| grm5b | 0.759 | rpl18 | -0.070 |
| csmd1a | 0.646 | rpl6 | -0.041 |
| lenep | 0.641 | actb1 | -0.038 |
| CR792439.1 | 0.630 | sec61g | -0.037 |
| lbx1a | 0.593 | col1a2 | -0.036 |
| LOC100002266.1 | 0.515 | mt-nd1 | -0.034 |
| LOC101885256 | 0.433 | pmp22a | -0.034 |
| mir125a-1 | 0.355 | ssr3 | -0.030 |
| zbtb25 | 0.340 | prdx2 | -0.030 |
| MANEAL | 0.336 | cox6a1 | -0.030 |
| gbx1 | 0.301 | XLOC-041870 | -0.030 |
| CR854980.1 | 0.297 | jun | -0.029 |
| hivep3a | 0.296 | atp5fa1 | -0.028 |
| smtnl1 | 0.294 | col1a1b | -0.028 |
| si:dkey-5n18.1 | 0.282 | myl9a | -0.028 |
| LOC110438375 | 0.257 | pfn1 | -0.027 |
| LOC108181449 | 0.248 | sparc | -0.027 |
| XLOC-024343 | 0.246 | col4a1 | -0.027 |
| mapre3a | 0.241 | ran | -0.026 |
| rcan3 | 0.221 | gnb1b | -0.026 |
| neu3.2 | 0.219 | hsbp1b | -0.026 |
| LOC101882492.1 | 0.217 | rbpms2a | -0.026 |
| bcr | 0.216 | rpl17 | -0.026 |
| scpp1 | 0.206 | ssr2 | -0.026 |
| pbrm1 | 0.204 | tpm4a | -0.026 |
| znf1059 | 0.202 | sub1a | -0.026 |
| mtus2a | 0.201 | atp5pb | -0.025 |
| hoxd3a | 0.201 | jpt1b | -0.025 |
| tnfrsf21 | 0.200 | cd63 | -0.025 |
| zfyve1 | 0.193 | edf1 | -0.025 |
| dpf1 | 0.188 | mibp2 | -0.025 |
| apc2 | 0.187 | skp1 | -0.025 |
| socs5a | 0.185 | slc25a3b | -0.025 |
| gb:ai877918 | 0.182 | ppp1cbl | -0.025 |
| nlgn2b | 0.182 | tomm20b | -0.025 |