Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| krt5 | 0.143 | hmgb1b | -0.066 |
| cyt1 | 0.142 | marcksb | -0.059 |
| cfl1l | 0.139 | si:ch211-288g17.3 | -0.057 |
| DSG2 | 0.139 | hmgb3a | -0.056 |
| krt4 | 0.138 | si:dkey-56m19.5 | -0.054 |
| si:ch211-105c13.3 | 0.138 | tuba1c | -0.054 |
| wu:fa03e10 | 0.138 | marcksl1a | -0.054 |
| cyt1l | 0.136 | hnrnpa0a | -0.053 |
| wu:fb18f06 | 0.135 | nova2 | -0.052 |
| epcam | 0.134 | h2afva | -0.050 |
| anxa1a | 0.133 | pfn2l | -0.050 |
| pycard | 0.133 | si:ch211-137a8.4 | -0.049 |
| krtt1c19e | 0.132 | nucks1a | -0.048 |
| pkp3a | 0.132 | ckbb | -0.047 |
| pnp5a | 0.132 | gpm6aa | -0.047 |
| evpla | 0.131 | tuba1a | -0.047 |
| si:ch211-125o16.4 | 0.131 | fabp3 | -0.046 |
| zgc:175088 | 0.131 | jpt1b | -0.046 |
| abcb5 | 0.130 | mdkb | -0.046 |
| si:ch211-166a6.5 | 0.130 | rtn1a | -0.046 |
| aep1 | 0.129 | si:dkey-276j7.1 | -0.045 |
| arhgef5 | 0.129 | zc4h2 | -0.045 |
| cldne | 0.129 | hdac1 | -0.044 |
| s100a10b | 0.128 | hp1bp3 | -0.044 |
| tmsb1 | 0.127 | ilf2 | -0.044 |
| zgc:153284 | 0.127 | vdac1 | -0.044 |
| znf185 | 0.127 | idh2 | -0.043 |
| lye | 0.126 | msna | -0.043 |
| mid1ip1a | 0.125 | seta | -0.043 |
| pof1b | 0.125 | elavl3 | -0.042 |
| s100v1 | 0.125 | smarce1 | -0.042 |
| stard14 | 0.125 | top1l | -0.042 |
| cast | 0.123 | ewsr1a | -0.041 |
| si:dkey-222n6.2 | 0.123 | hnrnpub | -0.041 |
| tmem176l.4 | 0.123 | ilf3b | -0.041 |