Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gli1 | 0.469 | rplp0 | -0.103 |
| LOC103911473 | 0.384 | rpl13a | -0.100 |
| si:dkey-172k15.11 | 0.368 | rpl32 | -0.095 |
| LOC101884742 | 0.361 | h3f3d | -0.086 |
| si:dkey-60a16.1 | 0.318 | cirbpb | -0.085 |
| stk19 | 0.314 | hmgb2a | -0.084 |
| NC-002333.14 | 0.304 | rps14 | -0.084 |
| LOC101884287 | 0.290 | rpl7a | -0.084 |
| slc36a4 | 0.285 | rpl7 | -0.081 |
| si:dkey-240n22.6 | 0.281 | rps9 | -0.079 |
| p3h2 | 0.272 | rps25 | -0.077 |
| BX957297.2 | 0.267 | rpl27 | -0.077 |
| sox9b | 0.256 | rps27.1 | -0.074 |
| neb | 0.243 | si:ch73-281n10.2 | -0.072 |
| rgs19 | 0.239 | si:ch73-1a9.3 | -0.071 |
| sb:cb470 | 0.238 | rps3a | -0.068 |
| LOC110439998 | 0.236 | hmgn2 | -0.065 |
| znf1097 | 0.231 | tubb4b | -0.064 |
| dgkh | 0.229 | ubc | -0.063 |
| LOC100332847 | 0.224 | h2afvb | -0.063 |
| snx11 | 0.223 | khdrbs1a | -0.060 |
| XLOC-032256 | 0.218 | sumo3a | -0.060 |
| LOC103911520 | 0.212 | rbx1 | -0.060 |
| LOC110439519 | 0.208 | hmgb2b | -0.059 |
| si:ch73-338a16.3 | 0.204 | ybx1 | -0.058 |
| trpm4a | 0.203 | hmgb3a | -0.057 |
| vps13a | 0.203 | hmga1a | -0.056 |
| DYNC2H1 | 0.202 | pax8 | -0.056 |
| znf1025 | 0.200 | rpl23a | -0.055 |
| tnc | 0.200 | btf3 | -0.055 |
| LOC101885018 | 0.196 | setb | -0.055 |
| alkbh8 | 0.187 | ran | -0.054 |
| gfer | 0.187 | nucks1a | -0.053 |
| cmc4 | 0.186 | ilf3b | -0.053 |
| LOC101885908 | 0.184 | dpy30 | -0.053 |