Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX322665.2 | 0.360 | sox3 | -0.048 |
| atoh1c | 0.226 | id1 | -0.044 |
| CR753876.1 | 0.208 | sox19a | -0.043 |
| npas2 | 0.208 | cited4b | -0.041 |
| si:ch73-281i18.7 | 0.204 | shisa2a | -0.041 |
| si:ch73-334d15.2 | 0.198 | cxcr4b | -0.037 |
| tuft1a | 0.183 | sfrp1a | -0.034 |
| lhx8b | 0.164 | smc4 | -0.033 |
| LOC101884045 | 0.164 | rrp1 | -0.032 |
| vwa5b2 | 0.162 | si:ch73-376l24.2 | -0.031 |
| cldn19 | 0.160 | eif3jb | -0.031 |
| gpr78b | 0.151 | uck2a | -0.030 |
| epas1a | 0.151 | hnrnpua | -0.030 |
| foxi3a | 0.137 | gemin2 | -0.029 |
| RF00440 | 0.137 | lmbr1l | -0.029 |
| ghrhrb | 0.136 | igf2bp3 | -0.029 |
| apobec2a | 0.128 | inka1a | -0.029 |
| plvapa | 0.128 | lfng | -0.029 |
| fetub | 0.125 | ccna1 | -0.029 |
| bmp3 | 0.124 | kri1 | -0.028 |
| gzm3.3 | 0.124 | riok1 | -0.028 |
| LOC103909553 | 0.123 | ncl | -0.028 |
| si:ch73-343l4.2 | 0.123 | gtf2e2 | -0.028 |
| aqp9b | 0.118 | mtfr2 | -0.027 |
| si:ch211-225b10.3 | 0.115 | CABZ01048392.1 | -0.027 |
| tfap2e | 0.112 | LOC108190024 | -0.027 |
| XLOC-016546 | 0.111 | vps26b | -0.027 |
| gig2f | 0.110 | stip1 | -0.027 |
| gpr35.1 | 0.107 | zgc:110216 | -0.027 |
| GABRR1 | 0.107 | sart3 | -0.027 |
| proser2 | 0.106 | mob3a | -0.027 |
| vwa3a | 0.105 | si:ch211-11k18.4 | -0.026 |
| XLOC-028373 | 0.105 | copz1 | -0.026 |
| CR848788.1 | 0.101 | calr3a | -0.026 |
| CABZ01039304.1 | 0.100 | snai2 | -0.026 |