Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-202p1.5 | 0.490 | cldnh | -0.138 |
| retsatl | 0.482 | icn | -0.117 |
| thy1 | 0.330 | gapdhs | -0.116 |
| BX927258.1 | 0.306 | ptmaa | -0.110 |
| XLOC-032526 | 0.296 | txn | -0.103 |
| LOC100537368 | 0.295 | anxa5b | -0.100 |
| hspb1 | 0.294 | gstp1 | -0.097 |
| LOC101882499 | 0.288 | COX3 | -0.097 |
| XLOC-029772 | 0.279 | rplp2 | -0.085 |
| LOC103910333 | 0.275 | wu:fb18f06 | -0.083 |
| ccl38a.4 | 0.275 | rnasekb | -0.081 |
| XLOC-039121 | 0.272 | ppiab | -0.080 |
| LOC110439405 | 0.265 | mt-co2 | -0.080 |
| cx39.4 | 0.264 | calm1b | -0.079 |
| wnt11f2 | 0.258 | fxyd1 | -0.076 |
| nid2a | 0.252 | zgc:162944 | -0.076 |
| XLOC-000380 | 0.251 | tmem59 | -0.075 |
| zgc:56699 | 0.251 | bik | -0.075 |
| XLOC-026578 | 0.245 | calm1a | -0.074 |
| mir205 | 0.242 | vamp2 | -0.074 |
| BX088603.3 | 0.240 | rtn1a | -0.074 |
| tfap2c | 0.239 | reep5 | -0.073 |
| frem1b | 0.237 | pvalb1 | -0.073 |
| XLOC-005432 | 0.236 | si:ch211-195b11.3 | -0.073 |
| XLOC-020797 | 0.234 | tnks1bp1 | -0.072 |
| dlx3b | 0.230 | gsto2 | -0.071 |
| klf17 | 0.230 | pvalb2 | -0.071 |
| pdgfaa | 0.227 | selenow1 | -0.070 |
| dlx4b | 0.226 | nfe2l2a | -0.070 |
| fgf24 | 0.223 | tmsb | -0.070 |
| prr11 | 0.220 | selenow2b | -0.070 |
| fezf1 | 0.217 | si:ch1073-443f11.2 | -0.068 |
| arid3b | 0.216 | spint2 | -0.067 |
| zp3a.2 | 0.211 | cotl1 | -0.066 |
| msx1b | 0.209 | jun | -0.065 |