Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pcdh2g13 | 0.143 | her15.1 | -0.031 |
| LOC110438492 | 0.133 | XLOC-003690 | -0.029 |
| si:dkey-238j22.1 | 0.102 | cldn5a | -0.028 |
| CT956066.1 | 0.078 | notch3 | -0.027 |
| LOC103909128 | 0.075 | btg2 | -0.026 |
| ppp1r3db | 0.069 | hmgb2a | -0.024 |
| BX908385.1 | 0.065 | sb:cb81 | -0.024 |
| tac1 | 0.065 | XLOC-003689 | -0.024 |
| hhex | 0.065 | gfap | -0.024 |
| LOC101883824 | 0.064 | XLOC-003692 | -0.023 |
| si:dkey-238o14.1 | 0.063 | her4.1 | -0.023 |
| CT027609.1 | 0.063 | sox3 | -0.023 |
| igl3v1 | 0.063 | id1 | -0.023 |
| ppp1r18 | 0.062 | sdc4 | -0.023 |
| MYL2 | 0.060 | bzw1b | -0.022 |
| CT573342.2 | 0.059 | zeb2a | -0.022 |
| BX908386.2 | 0.059 | msna | -0.022 |
| chodl | 0.059 | her12 | -0.022 |
| onecutl | 0.057 | stmn1a | -0.022 |
| snx22 | 0.057 | pcna | -0.022 |
| CR394552.1 | 0.057 | mdka | -0.021 |
| LOC103908875 | 0.056 | CU634008.1 | -0.021 |
| onecut3b | 0.056 | banf1 | -0.021 |
| LOC101883354 | 0.055 | cd63 | -0.021 |
| cntn2 | 0.055 | vamp3 | -0.021 |
| XLOC-033031 | 0.055 | rplp1 | -0.020 |
| XLOC-013624 | 0.055 | her8a | -0.020 |
| lin28a | 0.055 | dut | -0.020 |
| si:dkey-182i3.8 | 0.054 | ncalda | -0.020 |
| isl2a | 0.053 | pa2g4b | -0.020 |
| retreg1 | 0.053 | rbbp4 | -0.020 |
| onecut1 | 0.052 | dag1 | -0.020 |
| si:dkeyp-34c12.1 | 0.051 | nrarpb | -0.020 |
| LOC108190033 | 0.051 | her2 | -0.019 |
| slc18a3a | 0.051 | si:ch73-265d7.2 | -0.019 |