Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| myh9a | 0.063 | hmgb1b | -0.028 |
| wdfy4 | 0.059 | nova2 | -0.026 |
| zgc:101810 | 0.059 | tuba1c | -0.026 |
| cldni | 0.058 | hmgb3a | -0.025 |
| pfn1 | 0.058 | marcksb | -0.025 |
| hcls1 | 0.057 | gpm6aa | -0.024 |
| lama5 | 0.057 | si:ch211-288g17.3 | -0.024 |
| si:dkey-102c8.3 | 0.057 | mdkb | -0.023 |
| lrata | 0.056 | si:ch211-137a8.4 | -0.022 |
| padi2 | 0.056 | tuba1a | -0.022 |
| cldn1 | 0.055 | rtn1a | -0.021 |
| spaca4l | 0.055 | si:dkey-276j7.1 | -0.021 |
| thy1 | 0.054 | elavl3 | -0.020 |
| cebpb | 0.053 | hnrnpa0a | -0.020 |
| ecrg4b | 0.053 | hdac1 | -0.019 |
| ptk2bb | 0.053 | stmn1b | -0.019 |
| rac2 | 0.053 | zc4h2 | -0.019 |
| lgals3b | 0.052 | marcksl1a | -0.019 |
| zgc:171775 | 0.052 | chd4a | -0.018 |
| col7a1 | 0.051 | fabp3 | -0.018 |
| itgb1b.1 | 0.051 | fscn1a | -0.018 |
| tmsb1 | 0.051 | h2afva | -0.018 |
| arhgef5 | 0.050 | si:dkey-56m19.5 | -0.018 |
| mapk12a | 0.050 | smarce1 | -0.018 |
| sdr16c5a | 0.050 | sox11b | -0.018 |
| tp63 | 0.050 | tmeff1b | -0.018 |
| s100a10b | 0.049 | tubb5 | -0.018 |
| zgc:92380 | 0.049 | epb41a | -0.017 |
| actn1 | 0.048 | gng3 | -0.017 |
| dnase1l4.1 | 0.048 | gpm6ab | -0.017 |
| pak2a | 0.048 | mex3b | -0.017 |
| si:rp71-77l1.1 | 0.048 | nucks1a | -0.017 |
| tspan33a | 0.048 | si:ch211-133n4.4 | -0.017 |
| zgc:162730 | 0.048 | tmsb | -0.017 |
| zgc:92360 | 0.048 | apex1 | -0.016 |