Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.170 | si:ch1073-429i10.3.1 | -0.070 |
| s100a1 | 0.154 | calm1a | -0.067 |
| nnr | 0.153 | ccni | -0.063 |
| asb11 | 0.150 | gapdhs | -0.060 |
| si:ch1073-80i24.3 | 0.150 | tuba1c | -0.060 |
| zgc:56699 | 0.150 | rnasekb | -0.059 |
| avd | 0.149 | atp6v0cb | -0.057 |
| polr3gla | 0.147 | gpm6aa | -0.057 |
| si:dkey-68o6.5 | 0.147 | hbbe1.3 | -0.057 |
| h1m | 0.145 | rtn1a | -0.056 |
| stm | 0.145 | marcksl1a | -0.056 |
| tbx16 | 0.145 | hbae3 | -0.055 |
| si:dkeyp-114g9.1 | 0.143 | atp6v1g1 | -0.053 |
| si:dkey-228b2.6 | 0.141 | stmn1b | -0.053 |
| si:dkey-66i24.9 | 0.139 | atp6v1e1b | -0.052 |
| si:ch211-152c2.3 | 0.136 | hbae1.1 | -0.052 |
| hspb1 | 0.134 | gng3 | -0.051 |
| LOC100008030 | 0.134 | pvalb1 | -0.051 |
| zgc:77118 | 0.134 | pvalb2 | -0.050 |
| si:ch211-173m16.2 | 0.133 | gpm6ab | -0.049 |
| ddx4 | 0.132 | sncb | -0.049 |
| dkc1 | 0.131 | vamp2 | -0.049 |
| nanog | 0.130 | elavl3 | -0.048 |
| zp3.2 | 0.130 | hbbe1.1 | -0.048 |
| ccna1 | 0.128 | krt4 | -0.048 |
| fbl | 0.128 | wu:fb55g09 | -0.048 |
| polr2gl | 0.128 | cyt1 | -0.047 |
| nop58 | 0.127 | ywhag2 | -0.047 |
| ved | 0.127 | zgc:56493 | -0.047 |
| lrwd1 | 0.125 | atp6ap2 | -0.046 |
| bms1 | 0.124 | ckbb | -0.046 |
| vox | 0.124 | gabarapl2 | -0.046 |
| vrtn | 0.124 | atpv0e2 | -0.045 |
| hnrnpa1b | 0.123 | elavl4 | -0.045 |
| cldnd | 0.122 | fam168a | -0.045 |