| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nid1b | 0.089 | fgfbp2b | -0.058 |
| cyp26c1 | 0.085 | dlx5a | -0.052 |
| meis3 | 0.083 | ecrg4a | -0.050 |
| ednraa | 0.078 | dlx3b | -0.045 |
| rbpms2b | 0.078 | ucmab | -0.041 |
| cplx3a | 0.071 | dlx4a | -0.041 |
| akap12b | 0.068 | fgfr3 | -0.040 |
| marcksl1b | 0.068 | dlx4b | -0.040 |
| pdgfrb | 0.065 | col11a2 | -0.039 |
| marcksl1a | 0.064 | matn1 | -0.039 |
| tmem88a | 0.063 | acana | -0.038 |
| jam2b | 0.063 | vwde | -0.037 |
| tpm4a | 0.062 | mia | -0.037 |
| zic2a | 0.062 | hapln1b | -0.037 |
| gpr22a | 0.061 | spon2b | -0.036 |
| si:ch211-286o17.1 | 0.060 | rbp4 | -0.034 |
| tmem88b | 0.060 | snorc | -0.034 |
| her9 | 0.060 | nog3 | -0.034 |
| wt1b | 0.060 | tnxba | -0.034 |
| foxc1a | 0.059 | wwp2 | -0.034 |
| rdh10a | 0.059 | dlx6a | -0.032 |
| ripply1 | 0.058 | si:dkey-16p21.8 | -0.031 |
| kirrel1b | 0.057 | si:dkey-19b23.8 | -0.031 |
| sept2 | 0.057 | wisp3 | -0.031 |
| si:dkey-261h17.1 | 0.057 | stmn1b | -0.030 |
| pmp22a | 0.057 | pax9 | -0.030 |
| pim1 | 0.056 | ckbb | -0.030 |
| alcama | 0.056 | gpm6ab | -0.029 |
| tmem98 | 0.055 | gyg1b | -0.029 |
| cxadr | 0.055 | tnmd | -0.029 |
| inka1a | 0.055 | ptgdsa | -0.029 |
| tmsb4x | 0.054 | si:ch1073-184j22.1 | -0.028 |
| lamb1a | 0.053 | osr2 | -0.028 |
| lin28a | 0.053 | ptgdsb.2 | -0.028 |
| tbx1 | 0.053 | eef1da | -0.028 |