Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msh5 | 0.351 | rpl18 | -0.080 |
| si:ch1073-90m23.1 | 0.342 | rplp2l | -0.079 |
| LO018196.1 | 0.336 | rpl24 | -0.064 |
| tnni1b | 0.306 | uba52 | -0.062 |
| opn9 | 0.289 | rps2 | -0.059 |
| ust | 0.277 | hsp90ab1 | -0.058 |
| cnksr2b | 0.216 | rpl28 | -0.058 |
| tbx20 | 0.213 | rps13 | -0.057 |
| si:dkeyp-110a12.4 | 0.209 | rps26l | -0.056 |
| mettl24 | 0.203 | rpl36a | -0.054 |
| si:dkey-24h22.5 | 0.203 | eef1b2 | -0.053 |
| myl4 | 0.188 | rpl27 | -0.052 |
| si:dkey-31g6.6 | 0.188 | rpsa | -0.052 |
| mthfd1l | 0.187 | rpl35 | -0.050 |
| rnf220b | 0.180 | rpl15 | -0.050 |
| drd5a | 0.177 | rpl22l1 | -0.049 |
| snx20 | 0.166 | rpl5b | -0.049 |
| gdf10a | 0.165 | rpl4 | -0.049 |
| LOC100007686 | 0.163 | rps8a | -0.048 |
| zgc:173443 | 0.159 | COX3 | -0.048 |
| KCNJ6 | 0.156 | rps14 | -0.047 |
| nrgna | 0.153 | pabpc1a | -0.047 |
| grid2ipb | 0.152 | eef1g | -0.047 |
| mir125a-2 | 0.151 | rpl23a | -0.046 |
| smim1 | 0.150 | rpl14 | -0.046 |
| dmrta2 | 0.149 | rack1 | -0.046 |
| usp13 | 0.148 | rps20 | -0.046 |
| si:dkey-22o12.2 | 0.147 | atp5fa1 | -0.045 |
| pvalb9 | 0.146 | rpl8 | -0.045 |
| tnnt2a | 0.145 | sec61g | -0.045 |
| apoa4a | 0.138 | rpl17 | -0.044 |
| vamp1 | 0.138 | eef2b | -0.043 |
| rnf135 | 0.134 | ppiaa | -0.042 |
| otpb | 0.131 | tmem258 | -0.042 |
| slc10a1 | 0.125 | atp5mc3b | -0.042 |