Gene expression UMAP
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Other cell groups
all cells_thumb_all.png) |
blastomeres |
PGCs |
endoderm_thumb_endo.png) |
axial mesoderm_thumb_axia.png) |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural_thumb_neur.png) |
spinal cord / glia_thumb_glia.png) |
eye_thumb_eye.png) |
taste / olfactory_thumb_tast.png) |
otic / lateral line_thumb_otic.png) |
epidermis |
periderm_thumb_peri.png) |
fin |
ionocytes / mucous_thumb_iono.png) |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hes2.1 | 0.047 | hspb1 | -0.013 |
| foxn4 | 0.044 | npm1a | -0.013 |
| hes2.2 | 0.044 | col1a2 | -0.012 |
| vsx1 | 0.042 | pmp22a | -0.012 |
| rorb | 0.041 | aldob | -0.011 |
| im:7152348 | 0.040 | apoeb | -0.011 |
| ndrg1b | 0.037 | eif4ebp3l | -0.011 |
| neurod4 | 0.037 | nop10 | -0.011 |
| sept4a | 0.036 | si:dkey-16p21.8 | -0.011 |
| si:dkey-238o13.4 | 0.032 | sparc | -0.011 |
| CABZ01055522.1 | 0.031 | col5a1 | -0.011 |
| cadm3 | 0.031 | apoc1 | -0.010 |
| olig2 | 0.030 | col1a1a | -0.010 |
| ptprua | 0.030 | col1a1b | -0.010 |
| sinhcafl | 0.030 | dcn | -0.010 |
| insm1a | 0.029 | eef1da | -0.010 |
| neurog1 | 0.027 | eif4ebp3 | -0.010 |
| CU634008.1 | 0.027 | fbl | -0.010 |
| hes6 | 0.026 | fstl1b | -0.010 |
| LOC798783 | 0.026 | rbp4 | -0.010 |
| pif1 | 0.026 | rsl1d1 | -0.010 |
| sox18 | 0.026 | si:ch211-152c2.3 | -0.010 |
| btg1 | 0.025 | stm | -0.010 |
| foxg1b | 0.025 | bhmt | -0.010 |
| gpm6aa | 0.025 | mfap2 | -0.010 |
| igsf9b | 0.025 | aldh9a1a.1 | -0.009 |
| baz2ba | 0.024 | cebpd | -0.009 |
| mybl1 | 0.024 | col2a1b | -0.009 |
| otx2b | 0.024 | cxcl12a | -0.009 |
| tuba1b | 0.024 | ddx18 | -0.009 |
| zgc:153409 | 0.024 | dkc1 | -0.009 |
| cenpe | 0.023 | fkbp7 | -0.009 |
| dab1b | 0.023 | gar1 | -0.009 |
| lbr | 0.023 | krt8 | -0.009 |
| LOC101886429 | 0.023 | lrrc17 | -0.009 |