Gene expression UMAP
_all.png)
_legend.svg)
Other cell groups
all cells_thumb_all.png) |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle _thumb_musc.png) |
mural cells / non-skeletal muscle _thumb_mura.png) |
mesenchyme _thumb_mese.png) |
hematopoietic / vasculature _thumb_hema.png) |
pronephros _thumb_pron.png) |
neural_thumb_neur.png) |
spinal cord / glia_thumb_glia.png) |
eye_thumb_eye.png) |
taste / olfactory_thumb_tast.png) |
otic / lateral line |
epidermis_thumb_epid.png) |
periderm |
fin |
ionocytes / mucous_thumb_iono.png) |
pigment cells_thumb_pigm.png) |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| krt18b | 0.072 | apex1 | -0.023 |
| pmp22a | 0.070 | marcksb | -0.020 |
| asip2b | 0.065 | snrpd1 | -0.020 |
| fibina | 0.064 | snrpf | -0.020 |
| CU929237.1 | 0.063 | sox3 | -0.020 |
| twist2 | 0.063 | ddx39ab | -0.019 |
| pdgfrl | 0.061 | nova2 | -0.019 |
| col5a1 | 0.060 | tuba1a | -0.019 |
| LO018188.1 | 0.058 | cldn5a | -0.018 |
| arpc1b | 0.057 | snrpb | -0.018 |
| col11a1b | 0.057 | snrpe | -0.018 |
| si:dkey-12l12.1 | 0.056 | her15.1 | -0.018 |
| wfdc2 | 0.055 | msi1 | -0.017 |
| col12a1a | 0.052 | seta | -0.017 |
| il4 | 0.052 | snrpd2 | -0.017 |
| angptl1a | 0.050 | snrpg | -0.017 |
| serpinf1 | 0.050 | epcam | -0.016 |
| si:zfos-1069f5.1 | 0.050 | hes6 | -0.016 |
| socs3a | 0.050 | hnrnph1l | -0.016 |
| mfap2 | 0.050 | ilf2 | -0.016 |
| coro1a | 0.049 | sox19a | -0.016 |
| fmoda | 0.049 | XLOC-003692 | -0.016 |
| ly6m5 | 0.049 | alyref | -0.015 |
| si:ch1073-291c23.2 | 0.049 | CABZ01075068.1 | -0.015 |
| antxr2a | 0.048 | cbx3a | -0.015 |
| asip1 | 0.048 | gfap | -0.015 |
| ecrg4a | 0.048 | her12 | -0.015 |
| fstl1b | 0.048 | ilf3b | -0.015 |
| krt8 | 0.048 | ptges3b | -0.015 |
| col6a3 | 0.047 | setb | -0.015 |
| dcn | 0.047 | si:ch211-288g17.3 | -0.015 |
| foxc1b | 0.047 | smarce1 | -0.015 |
| reck | 0.047 | tmpob | -0.015 |
| CABZ01068358.1 | 0.046 | tuba1c | -0.015 |
| col2a1b | 0.046 | XLOC-003689 | -0.015 |